Hello!
Dear colleagues, I'm trying to reproduce results from your paper.
I have downloaded data and executed scripts, assuming that the first one is SHAPR and the second one is SHAPR+topological loss:
python run_train_script.py -p config/red-blood-cell.json
python run_train_script.py -p config/red-blood-cell-2D.json
Training has finished, but numbers on a test set which I see in WanDB are different from numbers in your paper (https://arxiv.org/pdf/2203.01703.pdf, Table 1).
In fact the list of metrics in WanDB (IoU_Error, dice_error, volume_error) are different from the errors presented in the paper (1 โ IoU, Volume, Surface area, Surface roughness).
The script "shapr/scripts/evaluation.py" only outputs figures.
Can you please give a hint how to reproduce results?