m31glx Goto Github PK

msccodebase

The Midnight Scanning Club Codebase

multiplecomparisonspermutationtesting

Code to perform FWE-correction for multiple comparisons using permutation testing (see Nichols & Holmes, 2001)

multisubject_sampler

multilayer method for sampling community structure from multiple subjects simultaneously

multivarcon

Multivariate connectivity analysis simulations for fMRI/MEEG

mypls

myPLS toolbox - PLS analysis for medical image processing

nbs-predict

A prediction-based extension of network-based statistics.

nbs_benchmarking

Expanded NBS tools for new statistics and benchmarking

network-generator

Code to generate networks in MATLAB

network-portrait-divergence

An information-theoretic, all-scales approach to comparing networks

networkanalysis

Java package that provides data structures and algorithms for network analysis.

node2vec

nonstandard_modularity_maximization

npso_model

MATLAB code for the nonuniform PSO (nPSO) model

null_models_net_neurosci

Null models in network neuroscience

olfactoryrsn

overlap_on_nxn_func

working on overlap stuff

paperscripts

Scripts for our papers. Readers can check, replicate or make use of the scripts in their future studies.

pcntoolkit

Toolbox for normative modelling and spatial inference of neuroimaging data. https://pcntoolkit.readthedocs.io/en/latest/

permutools

A MATLAB package for multivariate permutation testing

plotsurfaceroiboundary

Plot the boundaries of ROIs on a surface

predict_network

Predict missing connections in networks

preprocessfmri

quantmarineecolab.github.io

Lab website

raincloudplots

Code and tutorials to visualise your data that is both beautiful *and* statistically valid

rich_club

Statistical test for rich-clubness and null-models

rl_flexibility

analysis code for dynamic connectivity and learning task

rotate_parcellation

Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.

rs-fmri

Code for processing and analysis of resting state fMRI

snap

Stanford Network Analysis Platform (SNAP) is a general purpose network analysis and graph mining library.

spatial_fc

generate synthetic FC with prescribed distance dependence