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edge_community_triads

Function and Example Code for Edge Community Motifs

efc

evolution-brain-tuning

Code supporting 'Evolutionary shaping of human brain dynamics'

ezbids

A web service for converting directory full of DICOM files to BIDS

faskowitz2018wsbmlifespan

faskowitz2019wsbmratbrain

generative_models

generative models of synthetic structural brain networks

generativenetworkmodel

generativenetworkmodel-1

Akarca, D. et al. A generative network model of neurodevelopmental diversity in structural brain organization.

geneticbrainhubs

genlouvain

A generalized Louvain method for community detection implemented in MATLAB

gfpgan

GFPGAN aims at developing Practical Algorithms for Real-world Face Restoration.

glmdenoise

glmsingle

A toolbox for accurate single-trial estimates in fMRI time-series data

gretna

A Graph-theoretical Network Analysis Toolkit in MATLAB

halfpipe

ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data

hierarchicalconsensus

Identify hierarchical community structure in networks using consensus clustering

igraph

Library for the analysis of networks

infomap

Multi-level network clustering based on the Map Equation

knkutils

MATLAB utility functions written by Kendrick Kay

konect-analysis

Analysis of large complex network collections – part of the KONECT project by Jérôme Kunegis, University of Namur

konect-toolbox

Octave/Matlab toolbox for network analysis – part of the KONECT project by Jérôme Kunegis, University of Namur

ksmodel_fmridynamics

MATLAB code and data supporting Pope et al (2021)

lab

leidenalg

Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.

litrev

markello_spatialnulls

Code and documentation supporting Markello & Misic, 2021, "Comparing spatial null models for brain maps" (NeuroImage)

matlab_code

mcot

Multiband Censoring Optimization Tool (MCOT) for Resting-State Functional Connectivity Analyses

mricrogl12

v1.2 GLSL volume rendering. Able to view NIfTI, DICOM, MGH, MHD, NRRD, AFNI format images.