Project overview and instructions.

Run this command in cas12/src/pipelines/:

nextflow run main.nf

Edit the main.nf file and add a process to the workflow:

```
workflow {

myWorkflow {
    firstProcess()
    secondProcess(firstProcess.out)
}

}
```

Use GitHub Actions for:

Checking out code Setting up environments Running the Nextflow pipeline Deploying results

The key points of main.yml:

nextflow will refers to the version installed in the workflow Specify the full path to your main.nf script No need to specify path to the Nextflow executable Can set the NXF_VER env variable to pin version