A protein analysis tool that queries Uniprot database using blast accession ID's and retrieves comprehensive sequence, gene annotation data. Input: xml file containing BLASTP results Output: TXt file to output Tabular data from Uniprot, BLAST, Pfam, PROSITE
Before running, make sure to do the following: install python 3.6 pip install biopython pip install xml.dom pip install bs4 pip install bioservices
To run: python NEXUS.py
To run on sample data, use: python NEXUS.py <sample.xml> <kobe.txt>