humancellatlas Goto Github PK
Name: Human Cell Atlas
Type: Organization
Bio: An open international collaboration to create comprehensive reference maps of all human cells
Name: Human Cell Atlas
Type: Organization
Bio: An open international collaboration to create comprehensive reference maps of all human cells
Script for creating a repo of schemas in response to Github commits
Tools for generating metadata spreadsheets
This repo is to describe the metadata standards associated with the Human Cell Atlas
HCA metrics visualization via Grafana
DCP Migration Service, updating existing metadata in the DCP to be compatible to with the latest metadata schema versions.
Pipeline-tools for HCA DCP Secondary Analyses Service
Prototype implementation of the DCP Query Service, a metadata search engine for HCA
An R package with tools to help the data wrangling process
Interactive UI for generating metadata schema templates
This repository is for the test [meta]data associated with the latest updates of the HCA metadata schema.
Utilities for large scale distributed single cell data processing
Secondary Analysis Service of the Human Cell Atlas Data Coordination Platform
This repo hosts the deployment configuration and scripts for the Pipeline Execution Service
Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines
Analysis and benchmarking reports for Skylab pipelines
ENA Spring Boot Microservices Cookbook
Return build and application status badges
requirements, examples, and tests for expression matrix file formats
UNITY is a workflow benchmarking platform used for developing and comparing pipelines.
Source repo for Unity benchmark reference analysis WDLs and dependencies
DCP Ingestion File Upload Service
Index of the HCA wikis and other doc resources
Material for Workshops on Making HCA DCP Compatible Workflows
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