humancellatlas Goto Github PK
Name: Human Cell Atlas
Type: Organization
Bio: An open international collaboration to create comprehensive reference maps of all human cells
Human Cell Atlas's Projects
ingest-central
Ingest Central is the hub repository for the ingest service
ingest-client
Python client library for Ingest
ingest-core
Core ingest service components, including minimal metadata representation and caching
ingest-default-validator
Default validator for unknown file formats
ingest-example-data
Example data for use with the HCA DCP Ingest Component
ingest-exporter
ingest-fastq-validator
ingest-file-archiver
Service for storing HCA sequencing data in the EBI archives.
ingest-graph-validator
Prototype code for ingest metadata graph validation. This is to test assumptions that are not encoded in the schema. For example, we would like a warning if a bundle links a donor directly to a sequencing file. This will eventually be an integrated user tool to run before submission to check that linking and data modelling have been done correctly.
ingest-hca-to-ena
Converts and submits HCA metadata to ENA
ingest-importer
Importer for HCA Ingest Platform
ingest-integration-tests
integration tests for ingest/upload
ingest-kube-deployment
config files for accessing and managing Ingest service kubernetes clusters
ingest-node-accessioner
Ingest accessioning component using node-js
ingest-ontology-tooling
Tooling for ontology support in the ingest platform
ingest-python-standards
This repo sets out standards and resources for Python used by the HCA DCP Ingest team
ingest-scale-test
Scale tests for the ingest infrastructure
ingest-staging-manager
Client for handling the creation of staging areas triggered by the ingest service
ingest-state-tracking
Ingest service dedicated state tracking component
ingest-travel-guide
Documentation for developers new to the HCA DPC Ingest component
ingest-ui
This is the UI app for monitoring and tracking submissions to the DCP.
ingest-validator
Scripts for Ingest Validation Service
ingest-validator-js
Javascript validator for HCA metadata
lira
Notification listener for secondary analyses
logs
Infrastructure for centralizing and indexing logs
matrix-service
DCP Expression Matrix Service
matrix_semantic_map
Specification for a JSON schema to map expression matrix annotations to ontology terms
metadata-api
metadata-migration
Proof of concept library for migrating metadata.
metadata-schema
This repo is for the metadata schemas associated with the HCA
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.