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wheat_singlecellAtlas

Codes for Asymmetric gene expression and cell type specific regulatory networks in root of bread wheat revealed by single cell multiomics analysis. The datasets of wheat root snRNA-seq are stored at the Beijing Institute of Genomics (BIG) Data Center, Chinese Academy of Sciences, under accession number CRA008788 (https://ngdc.cncb.ac.cn/gsa/browse/CRA008788).

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wheat_singlecellatlas's Issues

The difference between part1 and part2 in 161010_Chinese_Spring_v1.0_pseudomolecules_parts.fasta

Thank you for sharing a single cell diagram analysis code. I have a question to ask, what is the relationship between chr1a_part1 and chr1a_part2? Is it a homologous chromosome?

The following is the length information of the sequence.Thanks again.

chr1A_part1 471304005
chr1A_part2 122798051
chr1B_part1 438720154
chr1B_part2 251131716
chr1D_part1 452179604
chr1D_part2 43273582
chr2A_part1 462376173
chr2A_part2 318422384
chr2B_part1 453218924
chr2B_part2 348037791
chr2D_part1 462216879
chr2D_part2 189635730
chr3A_part1 454103970
chr3A_part2 296739669
chr3B_part1 448155269
chr3B_part2 382674495
chr3D_part1 476235359
chr3D_part2 139317064
chr4A_part1 452555092
chr4A_part2 292033065
chr4B_part1 451014251
chr4B_part2 222603248
chr4D_part1 451004620
chr4D_part2 58852447
chr5A_part1 453230519
chr5A_part2 256543224
chr5B_part1 451372872
chr5B_part2 261776885
chr5D_part1 451901030
chr5D_part2 114179647
chr6A_part1 452440856
chr6A_part2 165638404
chr6B_part1 452077197
chr6B_part2 268911281
chr6D_part1 450509124
chr6D_part2 23083594
chr7A_part1 450046986
chr7A_part2 286659250
chr7B_part1 453822637
chr7B_part2 296797748
chr7D_part1 453812268
chr7D_part2 184873787

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