Comments (3)
[06:24:33] 🐍 Downloading miniconda... setup_qiime2:56
🐍 Done. setup_qiime2:62
🐍 Installing miniconda... setup_qiime2:56
[06:24:48] 🐍 Installed miniconda to /usr/local
. setup_qiime2:62
🔍 Downloading Qiime 2 package list... setup_qiime2:56
[06:24:49] 🔍 Done. setup_qiime2:62
🔍 Installing Qiime 2. This may take a little bit. setup_qiime2:56
🕐
[06:39:24] 🔍 Done. setup_qiime2:62
🌲 Installing Empress... setup_qiime2:56
[06:39:27] 🌲 Done. setup_qiime2:62
📊 Checking that Qiime 2 command line works... setup_qiime2:56
[06:39:40] 📊 Qiime 2 command line looks good 🎉 setup_qiime2:62
🔍 Fixed import paths to include Qiime 2. setup_qiime2:138
📊 Checking if Qiime 2 import works... setup_qiime2:140
[06:39:41] 📊 Qiime 2 can be imported 🎉 setup_qiime2:146
📊 Setting up QIIME 2 plugins... setup_qiime2:148
[06:39:44] Could not add the plugins 😭 setup_qiime2:153
An exception has occurred, use %tb to see the full traceback.
SystemExit: 1
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Okay that does not look to bad. Seems to be only the plugin registration. Let me check what is going on and get back to you.
What happens if you run any Time commands after that? Looks like it might still work because the Qiime installation succeeded.
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Okay, should be fixed now.
from isb_course_2022.
Related Issues (1)
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