fabianisensee / batchviewer Goto Github PK
View Code? Open in Web Editor NEWA tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.
License: Apache License 2.0
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batchviewer's Issues
Cannot use Pip install --upgrade batchviewer
I cannot install this library
crash
Dear FabianIsensee:
i used your BatchViewer in colab to visualize 3D MRI data with 4D numpy arrays (4,96,96,96) but my runtime restarted and colab crashed. whats the problem? how can i fix it?
Saggital View
Hi Fabian. Thank you for this tool it is very effective. I am only seeing the saggital view when I follow the (c,x,y,z) order. I am using nibabel to read image and masks. Is this intentional or am I missing something? Thank you so much!
No module named 'pyqtgraph'
In [1]: from batchviewer import view_batch
---------------------------------------------------------------------------
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-1-9eee403858d3> in <module>
----> 1 from batchviewer import view_batch
~/git/BatchViewer/batchviewer/__init__.py in <module>
1
----> 2 from .batchviewer import *
3 from .batchviewer import view_batch
~/git/BatchViewer/batchviewer/batchviewer.py in <module>
13 # limitations under the License.
14
---> 15 from pyqtgraph.Qt import QtGui, QtCore
16 import pyqtgraph as pg
17 import sys
ModuleNotFoundError: No module named 'pyqtgraph'install Error:
Hi, I want to install BatchViewer, while I met an install Error: Could not find a version that satisfies the requirement BatchViewer (from versions: none)...
How can I handle it??
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