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Fabian Isensee's Projects

batchviewer icon batchviewer

A tool to do quick and dirty inspection of multichannel 3D data. I use it mainly to visualize batches for deep learning.

cremi_python icon cremi_python

Python scripts to read and write the CREMI hdf5 file format.

hiddenlayer icon hiddenlayer

Neural network graphs and training metrics for PyTorch, Tensorflow, and Keras.

ilastik icon ilastik

ilastik-shell, applets, and workflows to string them together.

kits21 icon kits21

The official repository of the 2021 Kidney and Kidney Tumor Segmentation Challenge

lasagne icon lasagne

Lightweight library to build and train neural networks in Theano

monai icon monai

AI Toolkit for Healthcare Imaging

recipes icon recipes

Lasagne recipes: examples, IPython notebooks, ...

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