Comments (1)
You bring up a good point about the scale of the changes. The change to a partitioned format within the sub-package famdb has caused some grief due to the root partition being large. This is more of an issue with the FamDB/RepeatMasker projects and the current plan is to remedy this in the next release by producing a minimal FamDB root partition.
For TEtools it doesn't make much sense to use semantic versioning due to the breadth of software included. For example, the container may bump up one package by a patch and yet another by a major value and yet the overall changes to the end user may be minimal if they are only using RepeatMasker. There isn't a clear breaking/minor/patch distinction in what is included and the use-cases are not clearly nailed down. That said, we will consider increasing the major version number in the future when making any large organizational changes to what is packaged and the overall jump in size.
from tetools.
Related Issues (20)
- > The combine is a very confusing place for us. What causes such a deviation?
- Feature request: Make the Docker image multi-platform HOT 9
- forksys: Program terminated by a signal 9. HOT 1
- addRepbase.pl: no such file
- reasonaTE "https://github.com/DerKevinRiehl/transposon_annotation_reasonaTE" HOT 1
- hangup error on round5 of RepeatModeler on singularity sif v1.8, v1.85 HOT 1
- Error running repeatmodeler in container HOT 2
- rmblast does not work in new docker image for TETools 1.86. HOT 2
- error of repeatmasker in container HOT 1
- Docker Image Cannot Run LTRStruct pipeline HOT 1
- Customizing RepeatMasker libraries: Absent HOT 2
- Problems configuring RepeatClasifier on docker. HOT 8
- Request: LTR_retriever update from version 2.9.0 HOT 1
- Command line fasta file scaffolds_final.fa does not exist! HOT 2
- famdb.py: command not found HOT 2
- Taxonomy::new() needs a path for a famdb directory! HOT 6
- LTRPipeline : Error - could not open clusters.dat! HOT 3
- RepeatModeler BuildDatabase can not open file HOT 1
- MAFFT failed while running RepeatModeler
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from tetools.