cyang-2014 Goto Github PK

magrittr

R package to bring forward-piping features ala F#'s |> operator. Ceci n'est pas un pipe.

mandalorion

Analysis Pipeline to analyze Nanopore RNAseq data

mast

Tools and methods for analysis of single cell assay data in R

metagene

metaneighbor

metaphase

The software involved in the MetaPhase project, as described in G3 (http://dx.doi.org/10.1534/g3.114.011825)

mimosca

A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.

miso

MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation

mixrf

A random-forest-based approach for imputing clustered incomplete data

ml-class

Stanford Machine learning class excercises

monocle-release

mooctalk

motifmatchr

Fast motif matching in R

mutea-autosomal

Mutation rate analysis of autosomal loci

my.test_repo

nat

NeuroAnatomy Toolbox: An R package for the (3D) visualisation and analysis of biological image data, especially tracings of single neurons.

nbregression

Bayesian negative binomial generalized linear regression for single-cell RNA-seq

nucleoatac

nucleosome calling using ATAC-seq

nucleoatacr

R package for reading in & working with NucleoATAC outputs

orf-rater

Regression-based annotation of protein-coding sequences from ribosome profiling data

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

pandas-cookbook

Recipes for using Python's pandas library

phewas

The PheWAS R package

phylocsf

Phylogenetic analysis of multi-species genome sequence alignments to identify conserved protein-coding regions

plastid

Position-wise analysis of sequencing and genomics data

plotly

Create interactive web graphics from R via plotly's JavaScript graphing library

pmtk3

Probabilistic Modeling Toolkit for Matlab/Octave.

practicalmachinelearning_courseproject-_classevariable

johns hopkins university data science 8th course

predixcan

Code for the in-dev PrediXcan Project

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera