Feedstock license: BSD-3-Clause
Home: https://genieclust.gagolewski.com/
Package license: AGPL-3.0-only
Summary: A retake on the Genie algorithm - a robust hierarchical clustering method (Gagolewski, Bartoszuk, Cena, 2016 DOI:10.1016/j.ins.2016.05.003). Now faster and more memory efficient; determining the whole hierarchy for datasets of 10M points in low dimensional Euclidean spaces or 100K points in high-dimensional ones takes only 1-2 minutes. Allows clustering with respect to mutual reachability distances so that it can act as a noise point detector or a robustified version of 'HDBSCAN*' (that is able to detect a predefined number of clusters and hence it does not dependent on the somewhat fragile 'eps' parameter). The package also features an implementation of economic inequity indices (the Gini, Bonferroni index) and external cluster validity measures (partition similarity scores; e.g., the adjusted Rand, Fowlkes-Mallows, adjusted mutual information, pair sets index). See also the 'Python' version of 'genieclust' available on 'PyPI', which supports sparse data, more metrics, and even larger datasets.
Home: https://genieclust.gagolewski.com/
Package license: AGPL-3.0-only
Summary: A retake on the Genie algorithm - a robust hierarchical clustering method (Gagolewski, Bartoszuk, Cena, 2016 DOI:10.1016/j.ins.2016.05.003). Now faster and more memory efficient; determining the whole hierarchy for datasets of 10M points in low dimensional Euclidean spaces or 100K points in high-dimensional ones takes only 1-2 minutes. Allows clustering with respect to mutual reachability distances so that it can act as a noise point detector or a robustified version of 'HDBSCAN*' (that is able to detect a predefined number of clusters and hence it does not dependent on the somewhat fragile 'eps' parameter). The package also features an implementation of economic inequity indices (the Gini, Bonferroni index) and external cluster validity measures (partition similarity scores; e.g., the adjusted Rand, Fowlkes-Mallows, adjusted mutual information, pair sets index). See also the 'Python' version of 'genieclust' available on 'PyPI', which supports sparse data, more metrics, and even larger datasets.
Azure |
Name | Downloads | Version | Platforms |
---|---|---|---|
Installing r-genieclust
from the conda-forge
channel can be achieved by adding conda-forge
to your channels with:
conda config --add channels conda-forge
conda config --set channel_priority strict
Once the conda-forge
channel has been enabled, r-genieclust
can be installed with conda
:
conda install r-genieclust
or with mamba
:
mamba install r-genieclust
It is possible to list all of the versions of r-genieclust
available on your platform with conda
:
conda search r-genieclust --channel conda-forge
or with mamba
:
mamba search r-genieclust --channel conda-forge
Alternatively, mamba repoquery
may provide more information:
# Search all versions available on your platform:
mamba repoquery search r-genieclust --channel conda-forge
# List packages depending on `r-genieclust`:
mamba repoquery whoneeds r-genieclust --channel conda-forge
# List dependencies of `r-genieclust`:
mamba repoquery depends r-genieclust --channel conda-forge
conda-forge is a community-led conda channel of installable packages. In order to provide high-quality builds, the process has been automated into the conda-forge GitHub organization. The conda-forge organization contains one repository for each of the installable packages. Such a repository is known as a feedstock.
A feedstock is made up of a conda recipe (the instructions on what and how to build the package) and the necessary configurations for automatic building using freely available continuous integration services. Thanks to the awesome service provided by Azure, GitHub, CircleCI, AppVeyor, Drone, and TravisCI it is possible to build and upload installable packages to the conda-forge Anaconda-Cloud channel for Linux, Windows and OSX respectively.
To manage the continuous integration and simplify feedstock maintenance
conda-smithy has been developed.
Using the conda-forge.yml
within this repository, it is possible to re-render all of
this feedstock's supporting files (e.g. the CI configuration files) with conda smithy rerender
.
For more information please check the conda-forge documentation.
feedstock - the conda recipe (raw material), supporting scripts and CI configuration.
conda-smithy - the tool which helps orchestrate the feedstock.
Its primary use is in the construction of the CI .yml
files
and simplify the management of many feedstocks.
conda-forge - the place where the feedstock and smithy live and work to produce the finished article (built conda distributions)
If you would like to improve the r-genieclust recipe or build a new
package version, please fork this repository and submit a PR. Upon submission,
your changes will be run on the appropriate platforms to give the reviewer an
opportunity to confirm that the changes result in a successful build. Once
merged, the recipe will be re-built and uploaded automatically to the
conda-forge
channel, whereupon the built conda packages will be available for
everybody to install and use from the conda-forge
channel.
Note that all branches in the conda-forge/r-genieclust-feedstock are
immediately built and any created packages are uploaded, so PRs should be based
on branches in forks and branches in the main repository should only be used to
build distinct package versions.
In order to produce a uniquely identifiable distribution:
- If the version of a package is not being increased, please add or increase
the
build/number
. - If the version of a package is being increased, please remember to return
the
build/number
back to 0.