Mock-3 data about mockrobiota HOT 5 CLOSED

The issue here appears to be that the original headers use an unconventional nomenclature. Instead of ending in ":1" or ":2" to indicate lane number, these end in "/1" or "/2". Correcting this should solve the issue.

Question is: should we make this change and re-deposit all raw data or leave things as-is since this is an easy fix? @gregcaporaso @shiffer1 thoughts?

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Let me look at these I may be able to fix them like I did the others.
Thanks,
Arron

On Mon, Aug 29, 2016 at 1:18 PM, nbokulich [email protected] wrote:

The issue here appears to be that the original headers use an
unconventional nomenclature. Instead of ending in ":1" or ":2" to indicate
lane number, these end in "/1" or "/2". Correcting this should solve the
issue.

Question is: should we make this change and re-deposit all raw data or
leave things as-is since this is an easy fix? @gregcaporaso
https://github.com/gregcaporaso @shiffer1 https://github.com/shiffer1
thoughts?

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I'll run these through that fix and see if it solves the problem.
Arron

On Mon, Aug 29, 2016 at 1:50 PM, Arron Shiffer [email protected] wrote:

Let me look at these I may be able to fix them like I did the others.
Thanks,
Arron

On Mon, Aug 29, 2016 at 1:18 PM, nbokulich [email protected]
wrote:

The issue here appears to be that the original headers use an
unconventional nomenclature. Instead of ending in ":1" or ":2" to indicate
lane number, these end in "/1" or "/2". Correcting this should solve the
issue.

Question is: should we make this change and re-deposit all raw data or
leave things as-is since this is an easy fix? @gregcaporaso
https://github.com/gregcaporaso @shiffer1 https://github.com/shiffer1
thoughts?

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#32 (comment),
or mute the thread
https://github.com/notifications/unsubscribe-auth/AJuoUkdQc8w0Yg2kxfXWFVOspvttFKTSks5qkz6pgaJpZM4JPKVF
.

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Correction: the "normal" header format should end in " 1:N:0:1" or " 2:N:0:1" to indicate lane number. Note the leading space. Check out other sequencing runs to compare the usual format in case the examples I checked are out of date. Thanks @shiffer1 !

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The raw data have been updated to correct this issue, and new links are now available in dataset-metadata.tsv.

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