brentp Goto Github PK
Name: Brent Pedersen
Type: User
Bio: Doing genomics from the Netherlands
Twitter: brent_p
Location: Utrecht, The Netherlands
Name: Brent Pedersen
Type: User
Bio: Doing genomics from the Netherlands
Twitter: brent_p
Location: Utrecht, The Netherlands
convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.
Deep learning-based structural variant caller
run multiple sv evalution tools
Structural variant (SV) analysis tools
Tools for processing and analyzing structural variants.
Bayesian genotyper for structural variants
code for synstats.appspot.com
interface to tabix using cffi
simple bioinformatics command-line (t)ools (i) (w)ished (i) (h)ad.
add true-negative SVs from a population callset to a truth-set.
python stuff I use
simple python / cython wrapper to tokyo cabinet tables
SVBenchmarkingTool
broken example of rust <=> js so I can get help
nim-wrapper for variantkey -- (chrom, pos, ref, alt) -> uint64
vbyte compression for zig using https://github.com/cruppstahl/libvbyte
evaluating vcf parsing libraries
annotate a VCF with other VCFs/BEDs/tabixed files
perform genotype-phenotype-association tests on a VCF with logistic regression.
a golang library to read, write and manipulate files in the variant call format.
open files for buffered reading and writing in #golang
Wrapper for the zip library
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.