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john chuang's Projects

deepchem icon deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

dft icon dft

実験家のための第一原理計算入門 (in Japanese)

dmol-book icon dmol-book

Deep learning for molecules and materials book

dockcov2 icon dockcov2

A molecular docking pipeline for the drug database against SARS-CoV2

droppy icon droppy

Contact angle image processing analysis

drug-computing icon drug-computing

Educational materials for, and related to, UC Irvine's Drug Discovery Computing Techniques course (PharmSci 175/275), currently taught by David Mobley.

espresso icon espresso

Notes and tutorials on density functional theory calculations using Quantum Espresso.

examples icon examples

Examples for the book 'Data Science in Chemistry', ISBN: 978-3-11-062939-2, Published: 23 Nov 2020

fastbook icon fastbook

The fastai book, published as Jupyter Notebooks

ffr-lfdft icon ffr-lfdft

An experimental codes to do electronic structure calculations using Lagrange basis functions.

findiff icon findiff

Python package for numerical derivatives and partial differential equations in any number of dimensions.

flare icon flare

An open-source Python package for creating fast and accurate interatomic potentials.

freesolv icon freesolv

Experimental and calculated small molecule hydration free energies

genice icon genice

A swiss army knife to generate proton-disordered ice structures.

gmx-tools icon gmx-tools

Assorted Python Scripts to accompany the gmx analysis tools

gmx_mmpbsa icon gmx_mmpbsa

gmx_MMPBSA is a new tool based on AMBER's MMPBSA.py aiming to perform end-state free energy calculations with GROMACS files.

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