Wellcome Trust Sanger Institute - Human Genetics Informatics's Projects
Our test setup for Cromwell on (and off) Google Cloud
A cure for Cron's chronic email problem
The CernVM File System
A test framework for the CernVM-FS
Generates CWL files that do nothing.
Generates https://view.commonwl.org/ like workflows images, showing a complete workflow.
In development version of the future CWL v1.1 specification
Import a CWL workflow specification to Nextflow script (experimental)
Common Workflow Language reference implementation
Refining the process for ordering DNA Sequences
HGI's current version of DenovoGear, not the official release. A program to detect denovo-variants using next-generation sequencing data. (http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html)
An Arvados client/shell container image
Docker container for Arvados development (and running tests)
baton in a Docker container
Docker image with with a Docker client and Ansible (DA)
Dockerised EIGENSOFT software (https://github.com/DReichLab/EIG)
Ansible role for configuring Elasticsearch with Search Guard to run in Docker
Docker image containing gitlab client from https://github.com/NARKOZ/gitlab
Dockerised HPA-TAPAS
iRODS server in a Docker container
Version of hashicorp/packer with openssl and without a custom entrypoint
Allows building and running docker container images from behind a corporate proxy
Docker image with Python and Git Subrepo
Produces a diagram of the files in a given directory in a pdf
Dockerfile to build a trusted build of a container including texlive
Trusted docker build based on ubuntu with addition of Python and pip