ndio is a Python 2 and 3 module that enables big-data neuroscience, as well as direct interfacing with NeuroData workflows and servers. More complete documentation is available at the ndio documentation website.

ndio is now considered stable as of the 1.0 release in April 2016.

Before you install ndio, you'll need to have a few prerequisites. The first thing to do is to install numpy, which often does not jive well with the auto-installation process supported by pip.

If you already have numpy installed, then simply run:

pip install ndio

Generally, installation failures can be fixed by running the same line again, which, yeah, that's super janky, whatever. If that still fails, try cloning the repository from https://github.com/neurodata/ndio and running pip install -r requirements.txt.

If you're still having no luck, try checking out the travis.yml file in the main directory of the repository — these are the lines required to get ndio up and running on a totally blank Ubuntu 14.04 machine.

You can view a list of not-necessarily-too-up-to-date tutorials, and some information about getting started, over here.

Please submit bug reports, or get in touch at our GitHub repository. When contributing, please follow the Contribution Guidelines.

ndio is fully documented here.

Submit bug reports here.