A U-Net by Michela Marini that segments neurons and a web application by Wilfredo Molina.
Create a virtual environment, activate it, and execute
$ pip install -r requirements.txt
To spin-up a local server, execute
$ set FLASK_APP=application
$ flask run
The web application takes a PNG, JPG, JPEG, or GIF file and displays three 512ร512 images:
- the original image (resized),
- the segmented image, and
- the soma extraction.