scripts for benchmarking local ancestry
scripts for benchmarking local ancestry
taken from 1000G YRI,CEU,PEL, and MXL
used 1000G genetic maps interolated with the genetic maps generated by the HapMap 2 Project sourced from this github https://github.com/joepickrell/1000-genomes-genetic-maps
RFMix v1.54 LAMPLD MOSAIC ELAI Loter admixture simulation tool
Pandas Numpy bcftools vcftools Other dependencies required for software install (please see individual software installation)
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