An MR Motion Correction Matlab toolbox for registration, visualization and evaluation. The toolbox consists of three GUIs:

• RegGUI: for performing image registration with
  • elastix: included, from: http://elastix.isi.uu.nl/download.php
  • Hierarchical adaptive local affine (HALAR/LREG): included, from: http://www.isd.kcl.ac.uk/internal/hyperimage/
  • Local All-Pass (LAP): included
  • Demons: included, from: http://www.mathworks.com/matlabcentral/fileexchange/21451-multimodality-non-rigid-demon-algorithm-image-registration
• EvalGUI: for registration visualization and quantitative evaluation
• LandmarkGUI: for feature-based evaluation via landmark points, lines and ROIs

Please refer to the provided Documentation or to https://sites.google.com/site/kspaceastronauts/motion-correction/mocogui for more information.