Please see README.ipynb.
The simulations conducted in this paper can be run using the following steps:
- Open a terminal window and naviage to the
/Simulations
folder - To run the N = 100 simulation, type
sh run_sim_100.sh
into the command line and press enter - To run the N = 400 simulation, type
sh run_sim_400.sh
into the command line and press enter
Note: To change the number of cpus used in the simulation, open up the Run_simulations_x00.R
file and change ncpu <- min(4, availableCores())
. To change the number of MCMC iterations (50,000) or the burn-in parameter (25,000 iterations), change run_mcmc(..., 50000, 25000, 5)
.