Code to reproduce the analysis and figures in the paper Alignment and Integration of Spatial Transcriptomics Data. The Paste python package is located here. Note that this repo used Paste version 1.1.4 so any newer versions of Paste might have some issues (mostly likely related to minor utilities).

• All preprocessed datasets can be found on zenodo.
• For convenience there is a script called download_data.sh that will download all the relevant files to the data directory in the correct hierarchy.

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