Giter Club home page Giter Club logo

artemis's Introduction

Artemis

1) Add dataset

Add a data folder to the project root, next to the src folder. Add a CSV file representing each OMOP CDM v5 table (e.g. death.csv consisting of person_id,death_date,death_type_concept_id,cause_concept_id,cause_source_value,cause_source_concept_id)

This folder should consist of data/death.csv, data/person.csv and so on for each OMOP table, as defined here http://www.ohdsi.org/web/wiki/doku.php?id=documentation:cdm:single-page

For a comprehensive sample dataset, please use ftp://ftp.ohdsi.org/synpuf/synpuf_1.zip. Note, you'll have to remove the trailing _1 from the filenames (e.g. death_1.csv -> death.csv)

2) Start the server

From the project root, run the following command:

Mac

sbt/sbt compile run

Windows

sbt\sbt.bat compile run

Note, this may take a few minutes as the server has to reformat the CSV data into a more optimal format. This cost only occurs the first time the server is started.

3) Install client dependencies

Install node.js and the node package manager command line utilities https://nodejs.org/en/ https://www.npmjs.com/

Navigate to the client folder and run npm install to install client dependencies

4) Start the client

Start the client by running npm start from the client folder

5) View the application

Open the Chrome browser and navigate to http://localhost:3000/

artemis's People

Contributors

adam-arthur avatar adam-te avatar

Stargazers

Nikolay Kravets avatar Chris Hodapp avatar

Watchers

James Cloos avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.