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mblue9 avatar mblue9 commented on May 23, 2024

That makes sense to me. It had crossed my mind before that the significant column wasn't essential and that it might be better to let them explicitly choose the FDR to filter on to make the threshold clearer.
Yes fill_missing_values could go too I think.

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stemangiola avatar stemangiola commented on May 23, 2024

We have to keep in mind that this change (although I will use the deprecate framework) will break previous code that use the column significant.

But better taking this decision at this stage than when tidybulk will be more established.

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