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Generate Polarimetric Tensor Imaging (PTI) together with an Embedded DEMO for Visualisation and Interaction in 3D Slicer.

License: GNU General Public License v3.0

3d-slicer azimuth-angles demo depolarisation diffusion-tensor-imaging dti ellipsoids intensity interactive log-euclidean mapping matlab mueller-matrix polarimetry polarisation retardance tensor-field tractography visualisation

polarimetrictensorimaging's Introduction

PolarimetricTensorImaging

Generate Polarimetric Tensor Imaging (PTI) together with an Embedded DEMO for Visualisation and Interaction in 3D Slicer.

PTI_DEMO_example_red

Requirements

Processing

  • Matlab (R2021a, tested)

Tip

>> DEMO_3DSlicer_PolarimetricTensorImaging('HELP');

Note

After downloading the package, add the unzipped folder to Matlab search path with addpath(...);

Visualisation

Important

Install add-on extensions: DTI Process, Slicer DMRI, UKFTractography

Warning

Check 3D Slicer Coordinate System of reference.

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