sshen8 Goto Github PK
Name: Simon P Shen
Type: User
Company: @Harvard
Simon P Shen's Projects
acsat
Automated Cell Segmentation by Adaptive Thresholding (ACSAT)
bioconda-recipes
Conda recipes for the bioconda channel.
crispresso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
gantt-task-react
Gantt chart for React with Typescript
gseapy
Gene Set Enrichment Analysis in Python
harvardnow
labplotlib
multiplexnanopore
namedtensor
Named Tensor implementation for Torch
peglit
Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif
scanpy
Single-cell analysis in Python. Scales to >1M cells.
share-seq-alignmentv2
Pipeline for demultiplexing and aligning both ATAC and RNA data generated in SHARE-seqV2
umi-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
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