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Sergei Pond's Projects

454-filter icon 454-filter

Simple and FAST barcode splitter for 454 FASTA files.

bioext icon bioext

A few handy bioinformatics tools not already within BioPython

busted-srv icon busted-srv

The effect of synonymous rate variation on BUSTED

d3-array icon d3-array

Array manipulation, ordering, searching, summarizing, etc.

fade icon fade

A FUBAR Approach to Directional Evolution

hbl icon hbl

Various HyPhy Batch Language Files

hppy icon hppy

An intuitive HyPhy interface for Python

hyphy icon hyphy

HyPhy: Hypothesis testing using Phylogenies

iteroptbsrel icon iteroptbsrel

HyPhy batch files to iteratively optimize a BSREL model of sequence evolution

libtn93 icon libtn93

C library to compute Tamura-Nei distances between (nucleotide) strings

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