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eit-sequence's Issues

Tomography

Combine 5122 data and phase dat fils
multiply each 5122 quadrature set by reference pulse file
calculate 6110 variancees, fux 0, assign phase
create final sqz dataset with x and phi
run tomography on x and p data

New: Create MOT Timing

Create FPGA prog to time the mot B-field, and activate the B field and trapping lasers
This will create a B field signal which will then be sent to gate:

-the decimated TTL output from the chopper (for the aquisition)
-the EIT pulse sequence generation (for the signaling)

Implement: Send acquired data to queues

Use queues to implement loop parallelism, to send aquired data to a second loop for the purposes of:

graphing,
statistics
data saving

so that we don't slow down the actuall acquisition loop

Pulse Measurement Statistics

We need to incorporate details of the pulse using the pulse measurement vi:

converting time into timestamps
gather and plot statistics for the entire acquisition run for all of the pulse details

Impleement: Acquire Phase

We need to assign the phase to each quadrature. We could cheat by saying that the phase is just a function of thet variance, but its not true because there is a 50/50 chance of it being the first phase, or the pi/2 shift of the phase... so

yyeah..
phase needs to also be somehow associated with the quad data
this acquired

Implement Multirecord Acquisition

Acquisition of multiple records needs to be implemented - millions of pulses.

The data needs to be save to either seperate files, or one single file qith delimeters

Fix: Combine 5122 with EIT gen

once the 4122 program is working and polished, copy and paste it to teh host vi for the EIT fpga prog. Should bee simple once its working alone well

New: Visibility Program

Program should work as oscillocopep does...

Show arches
Calculate Visibility
Anotate Global and local Max-Min-Average

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