This project contains the Biocompute Object composer app shared with the CGC community.

To run the app:

• Click "Interactive Analysis", then open "Data Cruncher".
• Click "Create your first analysis", select "RStudio" and start the analysis.

When the editor is launched, switch to the "Terminal" tab in the lower left panel, run the following commands to copy the app from the project to the analysis session:

cp /sbgenomics/project-files/biocompute-composer.zip /sbgenomics/workspace/
unzip -q /sbgenomics/workspace/biocompute-composer.zip
rm /sbgenomics/workspace/biocompute-composer.zip

• Go to the biocompute-composer folder in the files panel (lower right), open and run through the code in app-setup.R to setup the environment (use Ctrl + Enter to run the code line-by-line).
• Open app.R, click the "Run App" button in the code editor panel to run the app.
• A dialog about popup windows may appear if you're running this for the first time, click "Try Again" to proceed.

Note: if running the app from a restarted analysis session, remember to run app-setup.R again before running the app.

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