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kraken2

The second version of the Kraken taxonomic sequence classification system

krakentools

KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files

learn-bioinformatics

licence-sublime-text

## Sublime Text 3 Serial key build is 3211 > * Added these lines into /etc/hosts 127.0.0.1 www.sublimetext.com 127.0.0.1 license.sublimehq.com > * Used the license key —– BEGIN LICENSE —– Member J2TeaM Single User License EA7E-1011316 D7DA350E 1B8B0760 972F8B60 F3E64036 B9B4E234 F356F38F 0AD1E3B7 0E9C5FAD FA0A2ABE 25F65BD8 D51458E5 3923CE80 87428428 79079A01 AA69F319 A1AF29A4 A684C2DC 0B1583D4 19CBD290 217618CD 5653E0A0 BACE3948 BB2EE45E 422D2C87 DD9AF44B 99C49590 D2DBDEE1 75860FD2 8C8BB2AD B2ECE5A4 EFC08AF2 25A9B864 —— END LICENSE ——​

machine-learning-course-in-ucas

国科大机器学习课程&机器学习笔记

marp-theme-academic

Academic Presentation Slides with Marp

marp-theme-nordic-beamer

Marp theme, with Beamer-like blocks, and Nord-like color scheme.

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

metaeuk

MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics

metagenomecourse2019

Course material for the metagenomics course

microbiomestatplot

Interpretation and visualization of microbiome charts

motus

motus - a tool for marker gene-based OTU (mOTU) profiling

ngs-analysis

二代测序数据分析

nodeppt

This is probably the best web presentation tool so far!

nullarbor

:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology

orthofinder

Phylogenetic orthology inference for comparative genomics

pan-genome-analysis

Processing pipeline for pan-genome visulization and exploration

pgap

NCBI Prokaryotic Genome Annotation Pipeline

pichost

pythondataanalysis

The data and code that used in my book.

r-learning

R语言自学笔记

readme

README文件语法解读，即Github Flavored Markdown语法介绍

rgraph

rna-seq-analysis

RNAseq analysis notes from Ming Tang

r_for_data_science

Materials for teaching R and tidyverse

scrna-seq

seqtk

Toolkit for processing sequences in FASTA/Q formats

seurat

R toolkit for single cell genomics

shiarthur03

sismid

Pathogen evolution, selection and immunity