This repository holds code used for experiments based on persistence homology on data derived from recent experimental data of de novo protein-protein interactions provided by Franziska Seeger.

Thanks go to:

• Marcio Gameiro for contributing code developed with Emerson Escolar which interfaces with uCGAL and PHAT to do weighted alpha complex persistence.

Rocklin, Gabriel J., et al. "Global analysis of protein folding using massively parallel design, synthesis, and testing." Science 357.6347 (2017): 168-175.