s-heisler / pycon2017-optimizing-pandas Goto Github PK

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DistutilsExecError                        Traceback (most recent call last)
~/anaconda3/lib/python3.6/distutils/unixccompiler.py in _compile(self, obj, src, ext, cc_args, extra_postargs, pp_opts)
    117             self.spawn(compiler_so + cc_args + [src, '-o', obj] +
--> 118                        extra_postargs)
    119         except DistutilsExecError as msg:

~/anaconda3/lib/python3.6/distutils/ccompiler.py in spawn(self, cmd)
    908     def spawn(self, cmd):
--> 909         spawn(cmd, dry_run=self.dry_run)
    910 

~/anaconda3/lib/python3.6/distutils/spawn.py in spawn(cmd, search_path, verbose, dry_run)
     35     if os.name == 'posix':
---> 36         _spawn_posix(cmd, search_path, dry_run=dry_run)
     37     elif os.name == 'nt':

~/anaconda3/lib/python3.6/distutils/spawn.py in _spawn_posix(cmd, search_path, verbose, dry_run)
    158                           "command %r failed with exit status %d"
--> 159                           % (cmd, exit_status))
    160             elif os.WIFSTOPPED(status):

DistutilsExecError: command 'gcc' failed with exit status 1

During handling of the above exception, another exception occurred:

CompileError                              Traceback (most recent call last)
<ipython-input-70-95c810850541> in <module>()
----> 1 get_ipython().run_cell_magic('cython', '-a', '\n# Haversine cythonized (no other edits)\nimport numpy as np\ncpdef haversine_cy(lat1, lon1, lat2, lon2):\n    miles_constant = 3959\n    lat1, lon1, lat2, lon2 = map(np.deg2rad, [lat1, lon1, lat2, lon2])\n    dlat = lat2 - lat1 \n    dlon = lon2 - lon1 \n    a = np.sin(dlat/2)**2 + np.cos(lat1) * np.cos(lat2) * np.sin(dlon/2)**2\n    c = 2 * np.arcsin(np.sqrt(a)) \n    mi = miles_constant * c\n    return mi')

~/anaconda3/lib/python3.6/site-packages/IPython/core/interactiveshell.py in run_cell_magic(self, magic_name, line, cell)
   2165             magic_arg_s = self.var_expand(line, stack_depth)
   2166             with self.builtin_trap:
-> 2167                 result = fn(magic_arg_s, cell)
   2168             return result
   2169 

<decorator-gen-128> in cython(self, line, cell)

~/anaconda3/lib/python3.6/site-packages/IPython/core/magic.py in <lambda>(f, *a, **k)
    185     # but it's overkill for just that one bit of state.
    186     def magic_deco(arg):
--> 187         call = lambda f, *a, **k: f(*a, **k)
    188 
    189         if callable(arg):

~/anaconda3/lib/python3.6/site-packages/Cython/Build/IpythonMagic.py in cython(self, line, cell)
    327 
    328         self._build_extension(extension, lib_dir, pgo_step_name='use' if args.pgo else None,
--> 329                               quiet=args.quiet)
    330 
    331         module = imp.load_dynamic(module_name, module_path)

~/anaconda3/lib/python3.6/site-packages/Cython/Build/IpythonMagic.py in _build_extension(self, extension, lib_dir, temp_dir, pgo_step_name, quiet)
    437             if not quiet:
    438                 old_threshold = distutils.log.set_threshold(distutils.log.DEBUG)
--> 439             build_extension.run()
    440         finally:
    441             if not quiet and old_threshold is not None:

~/anaconda3/lib/python3.6/distutils/command/build_ext.py in run(self)
    337 
    338         # Now actually compile and link everything.
--> 339         self.build_extensions()
    340 
    341     def check_extensions_list(self, extensions):

~/anaconda3/lib/python3.6/distutils/command/build_ext.py in build_extensions(self)
    446             self._build_extensions_parallel()
    447         else:
--> 448             self._build_extensions_serial()
    449 
    450     def _build_extensions_parallel(self):

~/anaconda3/lib/python3.6/distutils/command/build_ext.py in _build_extensions_serial(self)
    471         for ext in self.extensions:
    472             with self._filter_build_errors(ext):
--> 473                 self.build_extension(ext)
    474 
    475     @contextlib.contextmanager

~/anaconda3/lib/python3.6/distutils/command/build_ext.py in build_extension(self, ext)
    531                                          debug=self.debug,
    532                                          extra_postargs=extra_args,
--> 533                                          depends=ext.depends)
    534 
    535         # XXX outdated variable, kept here in case third-part code

~/anaconda3/lib/python3.6/distutils/ccompiler.py in compile(self, sources, output_dir, macros, include_dirs, debug, extra_preargs, extra_postargs, depends)
    572             except KeyError:
    573                 continue
--> 574             self._compile(obj, src, ext, cc_args, extra_postargs, pp_opts)
    575 
    576         # Return *all* object filenames, not just the ones we just built.

~/anaconda3/lib/python3.6/distutils/unixccompiler.py in _compile(self, obj, src, ext, cc_args, extra_postargs, pp_opts)
    118                        extra_postargs)
    119         except DistutilsExecError as msg:
--> 120             raise CompileError(msg)
    121 
    122     def create_static_lib(self, objects, output_libname,

CompileError: command 'gcc' failed with exit status 1