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breast_mri_qa's Introduction

Breast MRI QA

This package contains code which may be used to automate various aspects of MRI Quality Assurance required for UK the national breast screening programme.

Documentation Status PyPI version

Notebook

The demonstrative notebook may be found here.

CLI

The following instructions will allow you to use the command line interface.

git clone https://github.com/aaronfowles/breast_mri_qa.git
cd breast_mri_qa
python bmqa.py --config config.yml

Follow the instructions.

Configuration

The configuration for the CLI may be found here. It is written in YAML. The name_identifier_pairs specify the name of an image in the protocol and the corresponding search term used to identify an image type.

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