A python module to turn seismic output into dreem output
pip install seismic2dreemYou need a seismic file structure such as:
dreem_output_dir/
sample1/
table/
reference1/
section1/
relate-per-read.csv.gz
mask-per-pos.csv
import seismic2dreem
seismic2dreem.run(
seismic_dir = 'seismic_main_folder', # path to the folder containing the seismic output. Can be a list of folders.
output = 'dreem_output_dir', # path to the folder where the dreem output will be written
ow = False, # if True, existing files will be overwritten.
mask = True, # if True, use the mask-per-pos.csv file instead of the relate-per-read.csv.gz file (default: True)
beautify = True, # if True, the json files will be beautified. 10x slower and can generate bugs
verbose = True) # if True, print the progress of the conversionseismic2dreem --help
seismic2dreem path/to/this/seismic_main_folder path/to/this/other/seismic_main_folder -o path/to/dreem_output_dir --ow --beautify --verboseYves Martin des Taillades
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent