Predictions about Australia's COVID future.

Install pipenv:

pip install pipenv

Install dependencies (both Python and JS):

pipenv install
npm install

Build assets:

npm run webpack:dev
# or
npm run webpack:prod

Configure the database (for development and testing):

create user covid_futures@localhost identified by 'covid_futures';
create database covid_futures_test;
create database covid_futures_dev;
grant all privileges on covid_futures_test.* to covid_futures@localhost;
grant all privileges on covid_futures_dev.* to covid_futures@localhost;

echo "export COVID_FUTURES_DATABASE_URI_TEST='mysql+pymysql://covid_futures:covid_futures@localhost/covid_futures_test'" >> .env
echo "export COVID_FUTURES_DATABASE_URI='mysql+pymysql://covid_futures:covid_futures@localhost/covid_futures_dev'" >> .env

pipenv run load-schema
pipenv run ingest-data

Run the development server:

pipenv run server

Run tests:

pipenv run test
# or
pipenv run test-watch

To train the model from scratch:

pipenv run train-model

Run inference and save predictions to the database:

pipenv run predict

To create weekly predictions for the whole dataset (mostly to test the model):

pipenv run predict-weekly

To load predictions from a CSV file:

pipenv run load-csv <prediction name> <state> <csv file>

And to clear all predictions:

pipenv run clear-predictions

The production database URL is configured via the COVID_FUTURES_DATABASE_URI environment variable. For instructions for PythonAnywhere hosting, see:

https://help.pythonanywhere.com/pages/environment-variables-for-web-apps/

To initialise a production database:

pipenv run load-schema
pipenv run ingest-data

Copyright Rohan Mitchell, released under GPL v3 licence.