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Riley Doyle's Projects

rust-bio icon rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

rust-htslib icon rust-htslib

This library provides HTSlib bindings and a high level Rust API for reading and writing BAM files.

sais icon sais

Python wrapper around Yuta Mori's implementation of SA-IS suffix array construction.

salt icon salt

Software to automate the management and configuration of any infrastructure or application at scale. Get access to the Salt Open software package repository here:

suffix icon suffix

Fast suffix arrays for Rust (with Unicode support).

swipe icon swipe

Smith-Waterman database searches with inter-sequence SIMD parallelisation

wrapup icon wrapup

Skeleton for wrapping a C/C++ Library in Python

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