Comments (2)
Dear Yizhou,
thank you for your interest in iMOKA. You can find the releases of iMOKA ( singularity image and GUI installation packages ) at this page: https://github.com/RitchieLabIGH/iMOKA/releases under the "Assets" sections.
The version 1.0 is the one used for the publication, the v1.1 is the one in development with few bug fixes, improvements of the algorithm and annotation of the repetitive elements ( by default it's present the annotation of the human hg38 reference ).
Best regards,
Claudio
from imoka.
Dear Claudio,
Thank you for the quick reply. I download the iMOKA core. It works.
Regards
Yizhou
from imoka.
Related Issues (20)
- iMOKA GUI HOT 10
- Empty aggregated.sequences.bed.norep.bed causes seg fault HOT 2
- Memory control HOT 3
- Aggregate step crash because "Kept 0 alignments" HOT 2
- "{} Message" when opening K-mer list HOT 7
- Wonky reduce thread HOT 6
- Plotting legend issue with PCA HOT 4
- Sample Variation Normalization HOT 2
- Aggregate step segmentation faults HOT 6
- Confidence Interval for ROC AUC metric (Random Forest) HOT 2
- Error when starting singularity exec iMOKA preprocess.sh -i test HOT 13
- --threads does not work? HOT 2
- No error handling when there are no kmers above the thresholds counts at "aggregate" step HOT 1
- How to run it in my Mac? HOT 1
- How to incorporate paired end reads? HOT 2
- File not found error in iMOKA aggregate step HOT 6
- cant get singularity to run HOT 1
- Preprocessing not producing the "sorted.bin" files HOT 2
- aggregate produces many lines of "stdtr domain error" HOT 2
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