Initial implementation of model from: http://izhikevich.org/publications/whichmod.htm
See the Wiki for more details about current implementations.
This project forked from opensourcebrain/izhikevichmodel
GitHub repository for an OSB project for model from http://izhikevich.org/publications/whichmod.htm
Home Page: http://www.opensourcebrain.org/projects/izhikevichmodel
License: BSD 3-Clause "New" or "Revised" License
Initial implementation of model from: http://izhikevich.org/publications/whichmod.htm
See the Wiki for more details about current implementations.
The Vanilla Izhikevich Model
has 'b' set as:
h.m_RS_RS_pop[i].b = -0.0019999999
However the range explored in the Brute Force Optimization does not go through this point.
https://github.com/rgerkin/IzhikevichModel/blob/master/AIBS.ipynb#L25043
for j,b in enumerate(np.linspace(-3.5,-0.5,7)):
Should it instead read
for j,b in enumerate(np.linspace(-0.0019999999,-0.5,7)):
I realize my mistake b
is given units of nano Siemons when it is re-written in the NEUROML file.
model = ReducedModel(LEMS_MODEL_PATH,
name='a=%.3fperms_b=%.1fnS' % (a,b),
attrs={'//izhikevich2007Cell':
{'b':'%.1f nS' % b,
'a':'%.3f per_ms' % a,
'C':'150 pF',
'k':'0.70 nS_per_mV',
'vr':'-68 mV',
'vpeak':'45 mV'}
})
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