repronim / coco2019-training Goto Github PK

There's a slide that says "Think Locally; Act Globally". I may just be missing the joke but the phrase is "Think globally, act locally". (Which makes a better analogy to "Think reproducibly, act re-executably".

Can't submit a PR on a powerpoint, though.

@djarecka @yarikoptic - I made a Docker image with datalad, git, and git-annex, intended to be used for parts of day 1's presentations.

Generated with:

docker run --rm kaczmarj/neurodocker:0.4.3 generate docker \
  --base=neurodebian:stretch \
  --pkg-manager=apt \
  --install datalad git git-annex-standalone

And available on DockerHub as kaczmarj/coco2019:day1.

During the review session on day 2, I would like to show people how to build a singularity image in docker.

a pain point of some HPC users is that they cannot build their images on hpc and don't have singularity on their local machine.

i'll create an image put the dockerhub url here.