Comments (3)
This indicates that no ligands were detected in the training dataset and consequently no SAS points were labeled as positives.
Could be a problem in the dataset file or in the fact that you were using an old version.
Version on the main branch 2.0.1 probably does not support specifying relevant ligands by name yet.
For training new models please always use version from the develop branch.
Do you have the same problem when using version from the develop?
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Do you still have this problem with the new version from develop?
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This was related to the ions, I will recreate/re-open with data sample if this happens again.
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Related Issues (20)
- Extend and reorganize documentation
- Bug in -conservation_dirs argument parsing HOT 2
- Output directory parameter `-o` is sometimes ignored. HOT 1
- Building on WSL failing HOT 2
- easy way to get features HOT 2
- Issue with loading mmCIF files created in PyMOL HOT 3
- Out of memory error HOT 1
- installation not clear? HOT 12
- dataset-joined pdb_residues file doesn`t match with fasta sequence
- File path in *.ds file HOT 3
- [SUGGESTION] Release Binary Should Log To STDERR instead of to install directory HOT 1
- Dataset contains invalid files HOT 2
- No SLF4J providers were found! HOT 5
- No CSV output? HOT 7
- Question about the preprocessing of PDB file. HOT 1
- installation not clear
- Pocket Volume Estimations HOT 2
- data input rescore HOT 6
- Different results compared to PrankWeb? HOT 1
- incomplete test_output HOT 4
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