Comments (2)
Hi @mlewinsohn - thanks for posting the issue, and sorry for the trouble. If this is happening in the count_alleles
step it is likely a bug introduced in v1.0.2
that didn't get resolved in v1.1
as we would have hoped. Fortunately this behavior is somewhat easily reproducible on our end, and thus very fixable. Let me take a deep dive into HATCHet v1.1
and get back to you.
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Hi @vineetbansal, thanks for the prompt reply and for looking into this!
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Related Issues (20)
- Issue encountered in demo for the entire HATCHet pipeline HOT 2
- Slowdown in count_reads
- run.py is assuming variables we don't ship by default
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