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License: Apache License 2.0
Python wrapper created to help download metagenomic data from SRA or ENA databases
License: Apache License 2.0
Downloading in parallel if possible
Estimated data quality (although there are other tools for this)
output of research information: list of samples, the size and sequencing platform, coverage. Perhaps in the form of a table (API allows)
Request only metadata without downloading the data itself
a simple web interface
See list of RUNs in terminal before downloading
Add possibility to pass more parameters through wrapper to fastq-dump. Look through fastq-dump --help
and choose useful params if any.
Make the output data in the terminal more verbose (it is more clear to display the total number of samples that have been downloaded, and the number of RANs in each)
Any refactoring suggestion are welcome
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