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repos: 67.0 gists: 0.0

Name: Quantori

Type: Organization

Bio: Quantori is the premier digital IT services partner for life science and healthcare companies around the world.

Twitter: Quantori_USA

Location: United States of America

Blog: https://quantori.com

Quantori's Projects

nsaph-cms icon nsaph-cms

Pipelines to process CMS data: Medicaid and Medicare

nsaph-core-platform icon nsaph-core-platform

Core Data Platform providing generic infrastructure for data hosting and processing

nsaph-epa icon nsaph-epa

Toolkit for downloading and preprocessing of data provided by EPA

nsaph-gis icon nsaph-gis

Miscellaneous utilities to work with geographies and geometry based on shape files.

nsaph-utils icon nsaph-utils

Miscellaneous utilities for NSAPH data processing pipelines included in the data platform

picard icon picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

prj-covid-scoring icon prj-covid-scoring

This repository is dedicated to the scoring of lung diseases, where we propose a two-step workflow used for segmentation and scoring of lung diseases, including COVID-19

prj-thunderstorm icon prj-thunderstorm

ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging

sciglass icon sciglass

The database contains a vast set of data on the properties of glass materials.

scip-dockingfactory icon scip-dockingfactory

Docking Factory is a tool to automate molecular docking runs on an HPC cluster using the Dask framework. DockingFactory provides unified way of running molecular docking with different software backends: AutoDock Vina, Smina, Qvina2, and rDock.

scip-dockingfactory-bundle icon scip-dockingfactory-bundle

Docking Factory is a tool to automate molecular docking runs on an HPC cluster using the Dask framework. DockingFactory provides unified way of running molecular docking with different software backends: AutoDock Vina, Smina, Qvina2, and rDock.

scip-dockinginterface icon scip-dockinginterface

DockingInterface is a Python wrapper for open-source molecular docking programs: Autodock Vina, Smina, QVina2, and rDock.

scip-qvina icon scip-qvina

Quick Vina 2 is a fast and accurate molecular docking tool, attained at accurately accelerating AutoDock Vina. This fork of QVina 2 adds changes that allow it to run as part of DockingFactory.

scip-rdock icon scip-rdock

rDock is a fast and versatile Open Source docking program that can be used to dock small molecules against proteins and nucleic acids. This fork adds changes to rDock that allow it to be a part of DockingFactory.

scip-smina icon scip-smina

Smina is fork of AutoDock Vina that is customized to better support scoring function development and high-performance energy minimization. smina is maintained by David Koes at the University of Pittsburgh and is not directly affiliated with the AutoDock project. This fork of Smina adds changes that allow it to run as a part of DockingFactory.

scip-vina icon scip-vina

AutoDock Vina is one of the fastest and most widely used open-source docking engines. It is based on a simple scoring function and rapid gradient-optimization conformational search. It was originally designed and implemented by Dr. Oleg Trott in the Molecular Graphics Lab. This fork of Vina adds changes that allow it to be a part of DockingFactory.

simdflow icon simdflow

Code that helps to write logic based on SIMD operations

skills-ml icon skills-ml

Data Processing and Machine learning methods for the Open Skills Project

structure-seer icon structure-seer

The implementation, training and evaluation of a Structure Seer machine learning model designed for reconstruction of adjacency of a molecular graph from the labelling of its nodes.

study-tracker icon study-tracker

Study management software for lab-based research organizations

vina-gpu icon vina-gpu

A heterogeneous OpenCL implementation of AutoDock Vina

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