Example of running OMERO.server and OMERO.web in Docker.

This configuration will enable the export figure option based on: https://github.com/ome/omero-figure#enabling-figure-export (Option 2)

OMERO.server is listening on the standard OMERO ports 4063 and 4064. OMERO.web is listening on port 4080 (http://localhost:4080/).

The default login will be user root password omero. The initial password can be changed in docker-compose.yml.

Git clone this repository and within the cloned folder run the following commands:

docker-compose up -d
docker-compose logs -f

To make sure OMERO stores all the data on a different storage volume instead of writing to the server storage itself:

chmod ug=rwx path_to_external_storage

This will give the owner or the user read/write/executable permissions to the this folder. Change the docker-compose.yml file at this line:

    volumes:
        - "omero:/OMERO"

(

to:

volumes:
- "path_to_external_storage:/OMERO"

See here for more details on enabling figure export and changing location of storage ome#6

For more configuration options see:

• https://github.com/ome/omero-server-docker/blob/master/README.md
• https://github.com/ome/omero-web-docker/blob/master/README.md
• https://github.com/ome/omero-figure#enabling-figure-export
• ome#6