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Hi šŸ‘‹

I am a Research Scientist passionate about image and data analysis in biomedical research.

  • šŸ”­ Spend a lot of time analysing microscopy images in Python and ImageJ.
  • šŸ”§ Enjoy developing user-friendly open source tools.
  • šŸ‘Æ Iā€™m looking to collaborate on bioimage analysis tools and workflows.
  • šŸ¤” Would love help with identifying tools and methods to analyze multivariate data.
  • šŸ’¬ Ask me about image and data analysis in biomedical research.

Publications:

Talks:

Anurag's GitHub stats

Pradeep Rajasekhar's Projects

koa icon koa

Expressive middleware for node.js using ES2017 async functions

nocodeseg icon nocodeseg

šŸ”¬ Code-free deep segmentation for computational pathology

npy2bdv icon npy2bdv

Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.

oad icon oad

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools.

plant-seg icon plant-seg

A tool for cell instance aware segmentation in densely packed 3D volumetric images

pycalc icon pycalc

A function to do simple arithmetic from strings.

read-roi icon read-roi

Read ROI files .zip or .roi generated with ImageJ.

suite2p icon suite2p

cell detection in calcium imaging recordings

super-slomo icon super-slomo

PyTorch implementation of Super SloMo by Jiang et al.

tf_unet icon tf_unet

Generic U-Net Tensorflow implementation for image segmentation

tifffile icon tifffile

Read and write TIFF files. Forked from https://pypi.org/project/tifffile

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