1. Install Anaconda (Miniconda) from: https://conda.io/miniconda.html.

• NOTE: If you are using a windows machine, you will need to open the anaconda terminal to execute the commands below.

2. Create and activate a conda environment:

• conda create -n qgis_pyhat
• conda activate qgis_pyhat
• NOTE: If you want to restart installation, you should remove the qgis_pyhat environment and create a new one.
  • conda deactivate
  • conda env remove -n qgis_pyhat

3. To install the PyHAT library and dependencies:

• conda config --add channels conda-forge
• conda config --add channels usgs-astrogeology
• conda install -c usgs-astrogeology pyhat

4. To install QGIS:

• On windows: conda install -c conda-forge qgis
• On linux: conda install -c conda-forge qgis
• On OSX: conda install -c conda-forge qgis

5. Download the PyHAT QGIS plugin repo: https://github.com/USGS-Astrogeology/pyhat_qgis.git

• Click on the green "Clone or Download" button
• Click "Download Zip"

6. Finish installation through QGIS:

• Run QGIS: $ qgis

• On the bar at the top, click "Plugins > Manage and Install Plugins..."

• On the left, select "Install from ZIP"

• Select the ZIP file downloaded in Step 5, hit "Install Plugin"

• On the left, select "Installed"

• You should see PyHAT listed as one of the plugins.

• On the bar at the top in QGIS you should now see 'PyHAT'
• Click on it to see the two different menus for algorithms: M3, CRISM
• Make sure to have a layer (image) selected, and then click on any algorithm name
• You should now be able to view your new image in QGIS

1. Click on PyHAT on the top menu
2. Click on 'Setup Outpath', a pop-up window should have appeared.
3. Enter the FULL path of where you want to store your images i.e. /home/your_username/Desktop/
4. Click okay and start going!

1. Download this .tif to use as sample data: M3_4030seg_L2_aristcrater.tif

2. In QGIS, open the sample tif file as a layer

3. Select from the PyHAT option at the top:

• PyHAT > M3 > Pipe > bd1050

4. A new layer will have been placed in your view