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Basestack is a platform for rapid and real time analysis of Nanopore generated sequencing data. Basestack comes bundled with a series of both cutting edge public tools, some modified by JHU built phylogenetic and genomic pipelines, all integrated into a user interface ( that is quickly and seamlessly installable on all standard laptops on any of the major operating systems used today. Ultimately, the suite provides users with a means of quickly and accurately generating consensus sequences from viral data within minutes of starting. In addition, we provide a system for automated updates once the application is installed for any future changes or additions to the application.
License: GNU General Public License v3.0