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paoloinglese avatar paoloinglese commented on August 11, 2024

Hi,
if you refer to the filters, each filtering function returns an object with all information about the filtered peaks and the used measures.

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avacecil avatar avacecil commented on August 11, 2024

I want to use this package for pre-processing of MSI data, I was wondering if there is a built-in function to get an imzML file back after the filters have been applied or if I have to write the code to get the processed file. Thank you for your help!

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paoloinglese avatar paoloinglese commented on August 11, 2024

No, unfortunately, there's no built in way to extract the imzml. I can suggest to use the MALDIquantForeing package to save the imzml file.

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avacecil avatar avacecil commented on August 11, 2024

Sounds good, thank you!

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